This library reads and provides Random Access to BGZF(Bgzip) formatted file.
High-performance FASTQ reader and writer with mmap-first design. Supports plain, gzip, and BGZF inputs/outputs; optional multi-line parsing; explicit paired-end reading; sync and async APIs; optional `noodles-bgzf` interop.
Per-BED-region read depth — Rust port of samtools bedcov
Parallel-BGZF BAM reader/writer + raw-record edit shared by the rsomics-bam-* tool family. Layer A primitive.
Fast FASTQ reader for the rsomics-* tool family: decode-only producer thread + parallel parse, ISA-L igzip gz backend on Linux and a pure-Rust decoder elsewhere. Layer A primitive.
Bismark-aware BAM/SAM/CRAM I/O on top of noodles
FastX reads Fasta and FastQ files with little overhead.
Safe Rust wrapper for rapidgzip
Recompute the MD and NM aux tags against a reference FASTA — Rust port of samtools calmd
Crate that allows to read and write BAM, SAM and BGZIP files, written completely in Rust.
High-performance genomics I/O and interoperability layer
Utility library for working with explicitly BGZF compressed data