Pairwise sequence alignment algorithms (Needleman-Wunsch, Smith-Waterman) with BLOSUM and PAM scoring matrices.
The ngx-sequence-viewer, frequently referred to as the sequence viewer, provides visualization and manipulation features for biological sequences, or multiple sequence alignments.
A simple BLOSUM toolbox without dependencies.
BLOSUM feature for jean
Substitution matrices for use in protein sequence analysis and alignment.
Search, hash, sort, fingerprint, and fuzzy-match strings faster via SWAR, SIMD, and GPGPU
omicsx: SIMD-accelerated sequence alignment and bioinformatics analysis for petabyte-scale genomic data
SIMD accelerated pairwise genetic sequence alignment.