genome classification, probminhash hnsw, genome search
The jq of genomics. Fast, local, human-readable variant analysis.
GRIT: Genomic Range Interval Toolkit - high-performance genomic interval operations
Ultra-fast command-line tools for cell-free DNA fragmentomics analysis
Genome size estimation from long read overlaps
Genome size estimation from long read overlaps
Randomly subsample reads or alignments
A toolkit for finding telomeric repeats in a genome.
Ultra-fast genome viewer for interactive exploration of genomic data
Convert genomic alignments to transcriptomic BAM/RAD files.
Package to download NCBI genome data and metadata
Library for work with neat network
Turns scaffolded contigs and annotations into a genome.
Convert genome scaffold into different sequence format views
Genomer plugin for generating reports
Test assembly files for common errors which may lead to incorrect assembly
This gem add the study entity with suport for NGS, Microarray and other types of data
Nimbus is a Ruby gem to implement Random Forest in a genomic selection context.
Turns scaffolded contigs and annotations into a genome.
Library for visualizing genomic regions
Binary to use with scaffolder genome scaffolds
ChIPgps is an open source Ruby library for parsing result files of the Genome Positioning System which is a software tool to study protein-DNA interaction using ChIP-Seq data.
ruby library to read genome data
A sketch that may not see the light of day assembly pipeline and report generation