phyloxml.js is a JavaScript program for reading (SAX style parser) and writing phylogenetic trees in phyloXML format.
orthoxml, phyloxml and newick parsers for the iHam widget
convert newick string to phyloxml
Lib js for convert ALE format to recXML format
PhyloView 是一款基于 d3.js 的用于可视化系统进化树的插件（以下简称“本插件”），支持 tree 、radial 布局、 支持导入导出 Newick 、 NEXUS 、NeXML、Phyloxml等格式的树文件，且具备选中分支、编辑子树、添加子树、进化分支优化、树结构转换、字体切换、元数据展示、保存所选枝叶、重置树、将进化树图像导出为 SVG 、 PNG 等功能。
A packaged version of Christain M. Zmasek's archaeopteryx.js phylogenetic tree viewer
Legacy PhyD3 parser compatability library
Read, write, and manipulate phylogenetic trees
A JavaScript library for developing applications and interactive visualizations involving [phylogenetic trees](https://en.wikipedia.org/wiki/Phylogenetic_tree), written as an extension of the [D3](http://d3js.org) [hierarchy layout](https://github.com/d3/
PhyD3 phylogenetic tree viewer
Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
Validate recxml file using xsd
Read phylogenetic tree(s) in newick, phyloXML or recPhyloXML file and build a svg representation of the tree(s) allowing 1, 2 or 3 reconciliation levels.
OBSOLETE: Pease see 'thirdkind' instead! (Read phylogenetic tree(s) in newick, phyloxml or recPhyloXML file and build a svg representation of the tree(s).)
Methods and functions for phylogeny.
OBSOLETE: Pease see 'thirdkind' instead! (Read 2 recPhyloXML files and build a svg representation of 3 level reconciliation as gene/parasite/host.)
Routines for loading, saving, and manipulating taxonomic trees
Tree in Rows Elemental Format (TREF). Crate to parse, store and serialize trees.
Provides PhyloXML support for BioRuby.
Provides PhyloXML support for BioRuby. This bioruby-phyloxml gem replaces old unmaintained bio-phyloxml gem.