A full-screen terminal chat interface that connects to various AI APIs for real-time conversations
ARM-native bioinformatics library with streaming architecture and evidence-based optimization
Pure Rust reimplementation of Bio-Formats — read/write scientific image formats
Parse and manipulate common bioinformatic formats in nushell.
Unified multi-provider search CLI for AI agents — 12 providers, 13 modes, email verification, one binary
fqkit: a simple and cross-platform program for fastq file manipulation
This gem sucks.
Simple classes for parsing SAM, CIGAR and MD:Z strings, including slices. Methods for calling mutations in HGVS format and looking up consequences using Ensembl VEP REST API. Developed for calling mutations at an expected position in an alignment - e.g. Amplicon sequencing of CRISPR-induced mutations.
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