A map-reduce style parallel extension to seq_io
A highly parallel Perl 5 interpreter written in Rust
A minimal-copy parser for FASTA and FASTQ files built for paired parallel processing.
Fast FASTA and FASTQ readers
A command-line tool for processing and analyzing biological sequences.
High-performance FASTA/FASTQ IO and minimizer-based k-mer analysis utilities for Rust bioinformatics pipelines.
Pure-Rust port of quanTIseq (Finotello et al. 2019) immune-cell deconvolution — constrained least squares against the TIL10 signature — validated for numeric parity against the Bioconductor quantiseqr package.
Umbrella crate re-exporting the hdl-cat workspace
Bit-precise unsigned and signed integer newtypes for hdl-cat
Circom AST + emitter for hdl-cat IR graphs (bit-level, combinational + time-unrolled Mealy machines)
Circuit as symmetric monoidal category built on comp-cat-rs and hdl-cat-ir
Shared Error enum for hdl-cat