--- title: bam cli ---
Parser for BAM and BAM index (bai) files
eslint plugin for bam projects
Parser for BAM and BAM index (bai) files
OEH Sample Document for documenting BAM calculation utility
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js data collector for IBM BAM
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js data collector for IBM BAM
BANKSapi Web Component for Bank Access Management (BAM). This package is part of the BANKSapi WEB/Connect Banking Widgets to integrate banking features directly into your app.
Yeoman generator for BAM back services
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
mini bam template
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Node.js bindings for Nanalogue: single-molecule BAM/Mod-BAM analysis
Yeoman generator for BAM services
Vite plugin for local Bam App development environment
Crate that allows to read and write BAM, SAM and BGZIP files, written completely in Rust.
Ultra-fast command-line tools for cell-free DNA fragmentomics analysis
A fast and memory-efficient BAM processing toolkit for coverage calculation and quantification, designed as a scalable alternative to deeptools bamCoverage for large sequencing datasets. And additional BAM tools.
Tools and utilities for manipulation of BAM files for unusual use cases. e.g. single cell, MCC
High-performance BAM/SAM/CRAM toolkit written in Rust 2024. Drop-in samtools-compatible CLI (view/sort/index/merge/markdup/flagstat) plus a library API for embedding directly into aligners and variant callers.
Utility to check Binary Sequence Alignment / Map (BAM) files for corruption and repair them
Convert padded to unpadded BAM coordinates — Rust port of samtools depad
A high-performance genomics libary specialized in handling BAM and BigWig files
Rust CLI toolkit for niche optimized genomics file processing and target-based variant workflows
bamkit: a simple program for bam file manipulation
Recompute the MD and NM aux tags against a reference FASTA — Rust port of samtools calmd
Pure-Rust CLI over rust-htslib for BAM operations (view, sort, …). FFI-wrapper, output-compatible with samtools.
A super simple deployment utility using rsync and git
A description of your project
After you update a private gem, it's a pain to run bundle update on each dependent project. This gem solves this.
The library opens up the String class and adds a method writesize, which returns the size of the string.
This collection of gems will spice up your rails and kick your rubies up a notch. Bam!
"Converts BAM/VCF files into JSON for consumption by web apps"
This collection of gems will spice up your rails and kick your rubies up a notch. Bam!
A minimal web service on the top of sinatra to query bam files
type `/> simpleserve` into the command line and bam... it turns it into a web server
Binder of samtools for ruby, on the top of FFI. This project was born from the need to add support of BAM files to the gee_fu genome browser (http://github.com/danmaclean/gee_fu).
Bamboozled wraps the BambooHR API without the use of Rails dependencies.
New Sambamba library comes with a command-line tool for working with SAM/BAM files. This gem brings some of its functionality to Ruby.
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