Parses FASTA files
read indexed fasta and bgzipped fasta formats
Streamable FASTA parser
Parses FASTA files
Parse FASTA format sequences into typed records
Buffer Stream parser from FASTA to JSON
create indexed fasta files
DNA parser of FASTA format
Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format
Fasta renderer for JupyterLab
read feature and sequence data and produce highlighted fasta
A general purpose module for parsing FASTA files
FASTA DNA/RNA sequence reader
Fasta file parser
TS/ES7 implementation of FASTA like sequence parser
Typed client for NCBI Nucleotide database (EFetch) with FASTA and GenBank format support
Typed client for NCBI Protein database (EFetch) with FASTA and GenBank format support
Tools for working with FASTA/FASTQ files (Bioinformatics).
Sequencing I/O — parsers and writers for ABIF/SCF/FASTA/FASTQ and related bioinformatics formats
Work In Progress. A global npm module for processing data from ncbi into fasta files. Currently only working on Mac and Linux.
Module for parsing files in FASTA-format
A web component to select FastA file and generate sourmash signatures locally.
DataFire integration for FaSta - Station Facilities Status
read indexed fasta and bgzipped fasta formats
Tools for FASTA reading, writing and indexing.
Multi purpose fasta toolkit
A minimal fasta toolkit.
FUSTA leverages the FUSE interface to transparently manipulate multiFASTA files as independent files
Per-record statistics for FASTA files (num_seqs, sum_len, GC%, N50, …) — Rust port of `seqkit stats` (FASTA-only subset).
Make quick statistics in windows from a fasta file.
FASTA → SBOL 3 importer for the sbol-rs ecosystem. Pure-Rust, zero new transitive dependencies.
fakit: a simple program for fasta file manipulation
Ultra-fast, lazy, zero-copy Multi-FASTA parser.
Split a fasta file into several fasta files
A fast, parallel k-mer counter for DNA sequences in FASTA and FASTQ files
Fasta file parser
Rack Server API
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on the fasta_tool script that I think was written by Jason Stajich.
Provides nice, programmatic access to fasta and fastq files, as well as providing Sequence and Quality helper classes. No need for BioRuby ;)
Extract DNA Fasta sequence from assembly files.
provides programmatic access to fasta files
scbi_fasta is a ruby gem to read FASTA+QUAL files (DNA/RNA sequences).
Gem that helps to retrieve DNA sequence from UCSC
Generates the sliding iterable for the given fasta stretch and check its starting motifs
Simple FASTA/FASTQ/QSEQ parser library for Ruby.
Fast processing of FASTA/FASTQ files - a ruby wrapper around seqtk
ools to work with fasta files, indexed with samtools. The initial releases depend on bio-samtools, but that will change
Read/write compressed fastq or fasta files in fqbin format
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