A generator-based control-flow library.
Apollo plugin for Brainly Gene enabled projects.
Core functionality of Brainly Gene enabled project
Sentry plugin for Brainly Gene enabled projects.
Next.js plugin for Brainly Gene enabled projects.
Tools for Brainly Gene enabled projects. Generators, executors, checkers, etc.
Opinionated ESLint rules for Brainly Gene enabled projects.
Some gene animations
Client-side search for gene set selections
The Gene UI components library designed for BI tools
Use this package to bootstrap a new project using the Brainly Gene architecture.
Single Cell Expression Atlas homepage gene search form
Web components for display of Gene Ontology annotations
The Gene UI design system tokens
A framework-agnostic library for showing gene information as a tooltip
Gene UI icons distributed as SVG React components.
Text diff algorithm based on 'An O(NP) Sequence Comparison Algorithm' from Sun Wu, Udi Manber and Gene Myers
Reserved for GENE ワークス by GENESIS. See geneworks-mcp for the actual MCP server.
Gene transcripts track for HiGlass
Gene parsing package for Axie Infinity.
Reserved for GENE ワークス by GENESIS. See geneworks-mcp for the actual MCP server.
Reserved for GENE ワークス by GENESIS. See geneworks-mcp for the actual MCP server.
Web app and service for visualizing models of gene regulatory networks
@golden-tiger/regexp-gene
Crate providing a log matching framework written in Rust
Spatial gene regulatory network inference and in-silico perturbation (Rust port of SpaceTravLR)
Spatial gene regulatory network inference and in-silico perturbation (Rust port of SpaceTravLR)
A tool to analyze and manipulate transcript segment graph (TSG)
Gene Cluster prediction with Conditional Random Fields
Prismer Cloud SDK — Context API, Parse API, IM, Evolution Engine
Gene-set score per cell (mean of a gene list minus an expression-bin-matched random control set) — matches scanpy tl.score_genes(random_state=0) value-exactly
rvDNA — AI-native genomic analysis. 20-SNP biomarker risk scoring, streaming anomaly detection, 64-dim profile vectors, 23andMe genotyping, CYP2D6/CYP2C19 pharmacogenomics, variant calling, protein prediction, and HNSW vector search in pure Rust.
Pure-Rust port of the GSVA family of gene-set enrichment methods (GSVA, ssGSEA, z-score, PLAGE), validated for numeric parity against the Bioconductor GSVA package.
Count intersections between genes and sequences
Fast and accurate guide counting for CRISPR screens.
Read phylogenetic tree(s) in newick, phyloXML or recPhyloXML file and build a svg representation of the tree(s) allowing 1, 2 or 3 reconciliation levels.
Threadsafe, performant library for managing pools of resources, such as connections.
Sample genetic program in Ruby
Parses gene ontology .obo files, links terms through `is_a` and provides methods to find levels and traverse the tree.
System configuration tool for applying settings
Optimise anything that responds to 'fitness' and takes a hash
Algorithm for determining similar regions between nucleic acid sequences.
Gem for access to genenames.org api
Use this siftware with techniques like genecapture
The tool validates the input predicted genes and provides useful information (length validation, gene merge validation, sequence duplication checking, ORF finding) based on the similarities to genes in public databases.
Gene Expression in RBBT
A module which allows the GENE gyrokinetic code to be run using the CodeRunner framework.
GoRuby makes it easy to interact with the Gene Ontology by using the infrastructure setup in R. By connecting to R using RSRuby, the database and methods can be interrogated. Plus, keeping the R library up to date is much simpler than having to keep a GO implementation up to date.
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