RNA is a handlebars-based code generator.
A logging helper for the RNA cli.
Load and setup RNA configuration object.
A plugin for the Web Dev Server to transpile sources using the RNA bundler.
A Storybook integration with the RNA bundler and server.
A viewer for DNA, RNA, and protein sequences that supports many input formats
Single cell RNA-seq analysis in Javascript
A framework for esbuild plugins with transform and emit capabilities.
Visualizes RNA secondary structures.
**Unless you are building custom RNA generator then you probably want to use: [@compgen/rna](packages/macro-generators/rna)**
An RNA secondary structure display component
Html5 based UI library with blender-rna-style data binding
A wrapper of the javascript DNA, RNA and protein sequence viewer
Explore and design RNA structures.
Headless TypeScript library for DNA/RNA sequence editing, analysis, and visualization
Load French RNA database into a data-fair dataset
utility functions to handle DNA/RNA string data
A DNA-RNA-Protein translator library
A bundler, a server and a test runner for modern modules and applications.
A JavaScript, CSS and HTML bundler based on esbuild.
Fetch remote single-cell RNA-seq datasets for input into the bakana analysis pipeline.
FASTA DNA/RNA sequence reader
A webapp server based on Web Dev Server.
An RNA secondary structure display component
'Loot-Table Script' interpreter
Quick Probability Inference Engine on RNA Structural Alignment
Convert genomic alignments to transcriptomic BAM/RAD files.
Library of RNA Bioinformatics Algorithms
REDICAT - RNA Editing Cellular Assessment Toolkit: A highly parallelized utility for analyzing RNA editing events in single-cell RNA-seq data
Library of RNA secondary structure parameters
cfRNA QC + fragmentomics in a single BAM pass. Forked from seqeralabs/RustQC; extends with end-motif k-mers, soft-clip k-mers, fragment-length periodicity, per-gene Tier-2 features, panels, sex inference, SNP fingerprinting, saturation curves, and a versioned JSON+Parquet output schema.
A high-performance modification detection tool in Rust
NeoFold Program, Program for Maximum-expected-accuracy Estimations of RNA Secondary Structures with Incorporating Homologous-RNA sequences
Pure-Rust port of quanTIseq (Finotello et al. 2019) immune-cell deconvolution — constrained least squares against the TIL10 signature — validated for numeric parity against the Bioconductor quantiseqr package.
CLI utility for drawing RNA secondary structure
Fast RNA-seq QC in a single pass: dupRadar, featureCounts, 8 RSeQC tools, preseq, samtools stats, and Qualimap — reimplemented in Rust
Rna is a simple DSL for generating node.json files required by chef-solo.
A Ruby 2.0 API for interacting with command line tools involving RNA molecules through a standard interface.
Guard::Rna automatically builds node.json files.
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
scbi_fasta is a ruby gem to read FASTA+QUAL files (DNA/RNA sequences).
automatically produce *optimal* assemblies from DNA/RNA sequencing reads
Ruby Gem which translate RNA to Protein
Cluster DNA/RNA based on k-mer algorithm
scbi_fastq is a ruby gem to read/write FASTQ files (DNA/RNA sequences) with qualities in a variety of formats (Sanger, Solexa, Ilumina).
Calculated a metric that estimates read complexity at each base for RNA-seq BAM files. Alternative to pileup format.
Make your own plugins in Ruby for Nagios to run on the Nagios server or as NSCA plugins on remote servers.
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